Yi, Nengjun: search on Z-Library

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1

Bayesian group bridge for bi-level variable selection

Mallick, Himel, Yi, Nengjun

Journal:

Computational Statistics & Data Analysis

Year:

2017

Language:

english

File:

PDF, 2.55 MB

english, 2017

2

Principal component analysis of quantitative trait loci for immune response to adenovirus in mice

Solomon K. Musani, Huang-Ge Zhang, Hui-Chen Hsu, Nengjun Yi, Bernard S. Gorman, David B. Allison, John D. Mountz

Journal:

Year:

2006

Language:

english

File:

PDF, 137 KB

english, 2006

3

Negative binomial mixed models for analyzing microbiome count data

Zhang, Xinyan, Mallick, Himel, Tang, Zaixiang, Zhang, Lei, Cui, Xiangqin, Benson, Andrew K., Yi, Nengjun

Journal:

BMC Bioinformatics

Year:

2017

Language:

english

File:

PDF, 1.17 MB

english, 2017

4

Predicting multi-level drug response with gene expression profile in multiple myeloma using hierarchical ordinal regression

Zhang, Xinyan, Li, Bingzong, Han, Huiying, Song, Sha, Xu, Hongxia, Hong, Yating, Yi, Nengjun, Zhuang, Wenzhuo

Journal:

Year:

2018

Language:

english

File:

PDF, 1.48 MB

english, 2018

5

BhGLM: Bayesian hierarchical GLMs and survival models, with applications to Genomics and Epidemiology

Yi, Nengjun, Tang, Zaixiang, Zhang, Xinyan, Guo, Boyi, Hancock, John

Journal:

Year:

2018

Language:

english

File:

PDF, 291 KB

english, 2018

6

Bayesian hierarchical negative binomial models for multivariable analyses with applications to human microbiome count data

Pendegraft, Amanda H., Guo, Boyi, Yi, Nengjun, Zoetendal, Erwin G.

Journal:

Year:

2019

File:

PDF, 2.75 MB

2019

7

Fast Zero-Inflated Negative Binomial Mixed Modeling Approach for Analyzing Longitudinal Metagenomics Data

Zhang, Xinyan, Yi, Nengjun, Valencia, Alfonso

Journal:

Year:

2020

File:

PDF, 1.17 MB

2020

8

A new Bayesian lasso

Mallick, Himel, Yi, Nengjun

Journal:

Statistics and Its Interface

Year:

2014

File:

PDF, 2.69 MB

2014

9

Characteristics of individuals with breast cancer rearrangements in BRCA1 and BRCA2

Jackson, Sarah A., Davis, Andrew A., Li, Jun, Yi, Nengjun, McCormick, Shelley R., Grant, Carly, Fallen, Taya, Crawford, Beth, Loranger, Kate, Litton, Jennifer, Arun, Banu, Vande Wydeven, Kimberly, Sid

Journal:

Year:

2014

Language:

english

File:

PDF, 137 KB

english, 2014

10

WNT pathway signaling is associated with microvascular injury and predicts kidney transplant failure

Seifert, Michael E., Gaut, Joseph P., Guo, Boyi, Jain, Sanjay, Malone, Andrew F., Geraghty, Feargal, Della Manna, Deborah, Yang, Eddy S., Yi, Nengjun, Brennan, Daniel C., Mannon, Roslyn B.

Journal:

American Journal of Transplantation

Year:

2019

File:

PDF, 871 KB

2019

11

A two-SNPIL-6promoter haplotype is associated with increased lung cancer risk

Jun Chen, Reng-Yun Liu, Lixin Yang, Jun Zhao, Xueying Zhao, Daru Lu, Nengjun Yi, Baohui Han, Xiao-Feng Chen, Kui Zhang, Jun He, Zhe Lei, Yifeng Zhou, Boris Pasche, Xiangdong Li, et al

Journal:

Journal of Cancer Research and Clinical Oncology

Year:

2013

Language:

english

File:

PDF, 505 KB

english, 2013

12

Hierarchical Shrinkage Priors and Model Fitting for High-dimensional Generalized Linear Models

Yi, Nengjun, Ma, Shuangge

Journal:

Statistical Applications in Genetics and Molecular Biology

Year:

2012

Language:

english

File:

PDF, 4.31 MB

english, 2012

13

WNT pathway signaling is associated with microvascular injury and predicts kidney transplant failure

Seifert, Michael E., Gaut, Joseph P., Guo, Boyi, Jain, Sanjay, Malone, Andrew F., Geraghty, Feargal, Della Manna, Deborah, Yang, Eddy S., Yi, Nengjun, Brennan, Daniel C., Mannon, Roslyn B.

Journal:

American Journal of Transplantation

Year:

2019

Language:

english

File:

PDF, 871 KB

english, 2019

14

Association between IL-32 genotypes and outcome in infection-associated acute lung injury

John J Arcaroli,Nianjun Liu,Nengjun Yi,Edward Abraham

Journal:

Critical Care (BioMed Central)

Year:

2011

Language:

english

File:

PDF, 547 KB

english, 2011

15

Kernel-Machine Testing Coupled with a Rank-Truncation Method for Genetic Pathway Analysis

Yan, Qi, Tiwari, Hemant K., Yi, Nengjun, Lin, Wan-Yu, Gao, Guimin, Lou, Xiang-Yang, Cui, Xiangqin, Liu, Nianjun

Journal:

Genetic Epidemiology

Year:

2014

Language:

english

File:

PDF, 412 KB

english, 2014

16

Bayesian analysis of rare variants in genetic association studies

Nengjun Yi, Degui Zhi

Journal:

Genetic Epidemiology

Year:

2011

Language:

english

File:

PDF, 192 KB

english, 2011

17

A Bayesian Hierarchical Model for Detecting Haplotype-Haplotype and Haplotype-Environment Interactions in Genetic Association Studies

Li, Jun, Zhang, Kui, Yi, Nengjun

Journal:

Year:

2011

Language:

english

File:

PDF, 473 KB

english, 2011

18

Modeling Heterogeneity in the Genetic Architecture of Ethnically Diverse Groups Using Random Effect Interaction Models

Veturi, Yogasudha, de los Campos, Gustavo, Yi, Nengjun, Huang, Wen, Vazquez, Ana I., Kühnel, Brigitte

Journal:

Year:

2019

Language:

english

File:

PDF, 2.02 MB

english, 2019

19

16: Association of cervicovaginal microbial changes with pro- and anti-inflammatory biomarkers in cervicovaginal fluid

Subramaniam, Akila, Guo, Boyi, Wetta, Luisa, Lobashevsky, Elena, van der Pol, William, Lefkowitz, Elliot, Morrow, Casey, Szychowski, Jeff M., Yi, Nengjun, Owen, John

Journal:

American Journal of Obstetrics and Gynecology

Year:

2020

File:

PDF, 1.11 MB

2020

20

407: Effect of intramuscular progesterone on the cervicovaginal microbiome in high-risk women with midtrimester cervical shortening

Subramaniam, Akila, Guo, Boyi, Lobashevsky, Elena, van der Pol, William, Lefkowitz, Elliot, Morrow, Casey, Szychowski, Jeff M., Yi, Nengjun, Owen, John

Journal:

American Journal of Obstetrics and Gynecology

Year:

2020

File:

PDF, 317 KB

2020

21

Statistical analysis of genetic interactions

Journal:

Genetics Research

Year:

2010

Language:

english

File:

PDF, 191 KB

english, 2010

22

Bayesian bridge regression

Mallick, Himel, Yi, Nengjun

Journal:

Journal of Applied Statistics

Year:

2017

Language:

english

File:

PDF, 2.13 MB

english, 2017

23

Gender-Specific Association between Serum Uric Acid and Incident Fundus Arteriosclerosis in Chinese Population: A Retrospective Cross-Sectional Study

Liu, Qianqian, Liu, Chunxing, Gao, Yonghui, Zhang, Xinyan, Yi, Nengjun, Cao, Jianping, Wang, Yamin, Jiang, Yongbin, Tang, Zaixiang

Journal:

Scientific Reports

Year:

2020

File:

PDF, 1.53 MB

2020

24

408: Association of the cervicovaginal microbiome with cervical shortening in women with prior spontaneous preterm birth

Subramaniam, Akila, Guo, Boyi, Lobashevsky, Elena, van der Pol, William, Lefkowitz, Elliot, Morrow, Casey, Szychowski, Jeff M., Yi, Nengjun, Owen, John

Journal:

American Journal of Obstetrics and Gynecology

Year:

2020

File:

PDF, 769 KB

2020

25

Deviance information criterion (DIC) in Bayesian multiple QTL mapping

Daniel Shriner, Nengjun Yi

Journal:

Computational Statistics & Data Analysis

Year:

2009

Language:

english

File:

PDF, 496 KB

english, 2009

26

Mapping interacting QTL for count phenotypes using hierarchical Poisson and binomial models: an application to reproductive traits in mice

LI, JUN, REYNOLDS, RICHARD, POMP, DANIEL, ALLISON, DAVID B., YI, NENGJUN

Journal:

Genetics Research

Year:

2010

Language:

english

File:

PDF, 178 KB

english, 2010

27

Bayesian analyses of multiple epistatic QTL models for body weight and body composition in mice

YI, NENGJUN, ZINNIEL, DENISE K., KIM, KYOUNGMI, EISEN, EUGENE J., BARTOLUCCI, ALFRED, ALLISON, DAVID B., POMP, DANIEL

Journal:

Genetics Research

Year:

2006

Language:

english

File:

PDF, 437 KB

english, 2006

28

Rare-Variant Kernel Machine Test for Longitudinal Data from Population and Family Samples

Yan, Qi, Weeks, Daniel E., Tiwari, Hemant K., Yi, Nengjun, Zhang, Kui, Gao, Guimin, Lin, Wan-Yu, Lou, Xiang-Yang, Chen, Wei, Liu, Nianjun

Journal:

Year:

2015

Language:

english

File:

PDF, 565 KB

english, 2015

29

Development and validation of a model for predicting incident type 2 diabetes using quantitative clinical data and a Bayesian logistic model: A nationwide cohort and modeling study

Wilkinson, Lua, Yi, Nengjun, Mehta, Tapan, Judd, Suzanne, Garvey, W. Timothy, ClÃ©ment, Karine

Journal:

Year:

2020

File:

PDF, 1.26 MB

2020

30

The role of the fat mass and obesity associated gene (FTO) in breast cancer risk

Virginia Kaklamani, Nengjun Yi, Maureen Sadim, Kalliopi Siziopikou, Kui Zhang, Yanfei Xu, Sarah Tofilon, Surbhi Agarwal, Boris Pasche, Christos Mantzoros

Journal:

BMC Medical Genetics

Year:

2011

Language:

english

File:

PDF, 497 KB

english, 2011

31

Linkage Analysis of Quantitative Trait Loci in Multiple Line Crosses

Nengjun Yi, Shizhong Xu

Journal:

Year:

2002

Language:

english

File:

PDF, 185 KB

english, 2002

32

Hierarchical Generalized Linear Models for Multiple Groups of Rare and Common Variants: Jointly Estimating Group and Individual-Variant Effects

Yi, Nengjun, Liu, Nianjun, Zhi, Degui, Li, Jun, Schork, Nicholas J.

Journal:

Year:

2011

Language:

english

File:

PDF, 983 KB

english, 2011

33

Group Spike-and-Slab Lasso Generalized Linear Models for Disease Prediction and Associated Genes Detection by Incorporating Pathway Information

Tang, Zaixiang, Shen, Yueping, Li, Yan, Zhang, Xinyan, Wen, Jia, Qian, Chen’ao, Zhuang, Wenzhuo, Shi, Xinghua, Yi, Nengjun

Journal:

Year:

2017

Language:

english

File:

PDF, 642 KB

english, 2017

34

Haplotype-Based Methods for Detecting Uncommon Causal Variants With Common SNPs

Wan-Yu Lin, Nengjun Yi, Degui Zhi, Kui Zhang, Guimin Gao, Hemant K. Tiwari, Nianjun Liu

Journal:

Genetic Epidemiology

Year:

2012

Language:

english

File:

PDF, 1.01 MB

english, 2012

35

Pathway-Structured Predictive Modeling for Multi-Level Drug Response in Multiple Myeloma

Zhang, Xinyan, Li, Bingzong, Han, Huiying, Song, Sha, Xu, Hongxia, Yi, Zixuan, Hong, Yating, Zhuang, Wenzhuo, Yi, Nengjun

Journal:

Year:

2018

Language:

english

File:

PDF, 386 KB

english, 2018

36

Identification of DNA methylation associated enrichment pathways in adults with non-specific chronic low back pain

Aroke, Edwin N, Overstreet, Demario S, Penn, Terence M, Crossman, David K, Jackson, Pamela, Tollefsbol, Trygve O, Quinn, Tammie L, Yi, Nengjun, Goodin, Burel R

Journal:

Year:

2020

File:

PDF, 592 KB

2020

37

Multiple comparisons in genetic association studies: a hierarchical modeling approach

Yi, Nengjun, Xu, Shizhong, Lou, Xiang-Yang, Mallick, Himel

Journal:

Statistical Applications in Genetics and Molecular Biology

Year:

2014

Language:

english

File:

PDF, 1.75 MB

english, 2014

38

Detection of Gene × Gene Interactions in Genome-Wide Association Studies of Human Population Data

Musani, Solomon K., Shriner, Daniel, Liu, Nianjun, Feng, Rui, Coffey, Christopher S., Yi, Nengjun, Tiwari, Hemant K., Allison, David B.

Journal:

Year:

2007

Language:

english

File:

PDF, 296 KB

english, 2007

39

Predicting radiotherapy response for patients with soft tissue sarcoma by developing a molecular signature

Tang, Zaixiang, Zeng, Qinghua, Li, Yan, Zhang, Xinyan, Suto, Mark J., Xu, Bo, Yi, Nengjun

Journal:

Oncology Reports

Year:

2017

Language:

english

File:

PDF, 1.34 MB

english, 2017

40

A new method for estimating effect size distribution and heritability from genome-wide association summary results

Zhang, Lei, Shen, Yue-Ping, Hu, Wen-Zhu, Ran, Shu, Lin, Yong, Lei, Shu-Feng, Zhang, Yong-Hong, Papasian, Christopher J., Yi, Nengjun, Pei, Yu-Fang

Journal:

Year:

2016

Language:

english

File:

PDF, 1.09 MB

english, 2016

41

Mapping quantitative trait loci with epistatic effects

YI, NENGJUN, XU, SHIZHONG

Journal:

Genetics Research

Year:

2002

Language:

english

File:

PDF, 553 KB

english, 2002

42

The Spike-and-Slab Lasso Generalized Linear Models for Prediction and Associated Genes Detection

Tang, Zaixiang, Shen, Yueping, Zhang, Xinyan, Yi, Nengjun

Journal:

Year:

2017

Language:

english

File:

PDF, 5.26 MB

english, 2017

43

Pathway-Structured Predictive Model for Cancer Survival Prediction: A Two-Stage Approach

Zhang, Xinyan, Li, Yan, Akinyemiju, Tomi, Ojesina, Akinyemi I., Buckhaults, Phillip, Liu, Nianjun, Xu, Bo, Yi, Nengjun

Journal:

Year:

2017

Language:

english

File:

PDF, 1.66 MB

english, 2017

44

Identification of donor microbe species that colonize and persist long term in the recipient after fecal transplant for recurrent Clostridium difficile

Kumar, Ranjit, Yi, Nengjun, Zhi, Degui, Eipers, Peter, Goldsmith, Kelly T., Dixon, Paula, Crossman, David K., Crowley, Michael R., Lefkowitz, Elliot J., Rodriguez, J. Martin, Morrow, Casey D.

Journal:

npj Biofilms and Microbiomes

Year:

2017

Language:

english

File:

PDF, 1.16 MB

english, 2017

45

NBZIMM: negative binomial and zero-inflated mixed models, with application to microbiome/metagenomics data analysis

Zhang, Xinyan, Yi, Nengjun

Journal:

BMC Bioinformatics

Year:

2020

File:

PDF, 3.80 MB

2020

46

Exosome-Transmitted PSMA3 and PSMA3-AS1 Promotes Proteasome Inhibitors Resistance in Multiple Myeloma

Xu, Hongxia, Han, Huiying, Song, Sha, Yi, Nengjun, Qian, Chen'ao, Qiu, Yingchun, Zhou, Wenqi, Hong, Yating, Zhuang, Wenyue, Li, Zhengyi, Li, Bingzong, Zhuang, Wenzhuo

Journal:

Clinical Cancer Research

Year:

2019

Language:

english

File:

PDF, 4.79 MB

english, 2019

47

Bronchopulmonary Dysplasia is Associated with Reduced Oral Nitrate Reductase Activity in Extremely Preterm Infants

Gentle, Samuel J., Ahmed, Khandaker A., Yi, Nengjun, Morrow, Casey D., Ambalavanan, Namasivayam, Lal, Charitharth V., Patel, Rakesh P.

Journal:

Year:

2020

File:

PDF, 206 KB

2020

48

Intentional Weight Loss Reduces Mortality Rate in a Rodent Model of Dietary Obesity

Joseph R. Vasselli, Richard Weindruch, Steven B. Heymsfield, F. Xavier Pi-Sunyer, Carol N. Boozer, Nengjun Yi, Chenxi Wang, Angelo Pietrobelli, David B. Allison

Journal:

Year:

2005

Language:

english

File:

PDF, 209 KB

english, 2005

49

Haplotype Kernel Association Test as a Powerful Method to Identify Chromosomal Regions Harboring Uncommon Causal Variants

Lin, Wan-Yu, Yi, Nengjun, Lou, Xiang-Yang, Zhi, Degui, Zhang, Kui, Gao, Guimin, Tiwari, Hemant K., Liu, Nianjun

Journal:

Genetic Epidemiology

Year:

2013

Language:

english

File:

PDF, 791 KB

english, 2013

50

172: Are cervicovaginal microbiome differences associated with cerclage success in high-risk women with cervical shortening?

Subramaniam, Akila, Guo, Boyi, Lobashevsky, Elena, van der Pol, William, Lefkowitz, Elliot, Morrow, Casey, Szychowski, Jeff M., Yi, Nengjun, Owen, John

Journal:

American Journal of Obstetrics and Gynecology

Year:

2020

File:

PDF, 271 KB

2020

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